PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.AKW6F
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 238aa    MW: 25759.8 Da    PI: 5.9042
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.AKW6FgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.3e-11149196455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Araip.AKW6F 149 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 196
                  8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.85E-11143200No hitNo description
SuperFamilySSF474597.2E-18143213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828145195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-18145214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-8149196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10151201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MDPGAMMNEG SFGNGGGNTV PFSLAEIWPF PQAVNAAGGG ALGLRRPQFG LGQFGDFIAG  60
PNREPGPVAS EQKAASGGGG GGSRKRRESE EESPKGVSTS NVAPNAVEEE ERQASSGKPA  120
DQNNQTPPPD PPRQDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD LVPGCNKVIG  180
KALVLDEIIN YIQSLQRQVE FLSMKLEAVN SRLNTGIEAF PPKDVSLQRF LYWDVEFC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956812.11e-147PREDICTED: transcription factor BPE
SwissprotQ0JXE79e-75BPE_ARATH; Transcription factor BPE
TrEMBLV7CAC21e-102V7CAC2_PHAVU; Uncharacterized protein
STRINGGLYMA08G40541.13e-90(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.16e-65BIG PETAL P